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Research ArticleIMAGING

Characterization and Reduction of Noise in Dynamic PET Data Using Masked Volumewise Principal Component Analysis

Per-Edvin Svensson, Johan Olsson, Fredrik Engbrant, Ewert Bengtsson and Pasha Razifar
Journal of Nuclear Medicine Technology March 2011, 39 (1) 27-34; DOI: https://doi.org/10.2967/jnmt.110.077347
Per-Edvin Svensson
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Johan Olsson
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Fredrik Engbrant
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Ewert Bengtsson
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Pasha Razifar
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Article Figures & Data

Figures

  • FIGURE 1.
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    FIGURE 1.

    Cross-section of phantom reconstructed with FBP. The 3 ROIs are outlined in white.

  • FIGURE 2.
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    FIGURE 2.

    Schematic of higher-order PC noise prenormalization.

  • FIGURE 3.
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    FIGURE 3.

    Removal of masked volumewise (MVW) PCs from X.

  • FIGURE 4.
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    FIGURE 4.

    Illustration of masked volumewise PCA procedure.

  • FIGURE 5.
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    FIGURE 5.

    Arithmetic mean (A–C) and sample SD (D–F) for FBP (dashed line) and OSEM (solid line) over time in the 3 ROIs: high-activity ROI (A and D), low-activity ROI (B and E), and no-activity ROI (C and F).

  • FIGURE 6.
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    FIGURE 6.

    Arithmetic mean (A–C) and sample SD (D–F) for FBP (dashed line) and OSEM (solid line) for different axial offsets in the 3 ROIs: high-activity ROI (A and D), low-activity ROI (B and E), and no-activity ROI (C and F).

  • FIGURE 7.
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    FIGURE 7.

    Scaled plots of SD used by higher-order PC, from full-body study using 18F-FDG (A) and brain study using 11C-Pittsburgh compound B (B). Higher-order PC 1 (□), higher-order PC 2 (⋄), and higher-order PC 3 (▵Δ) are compared with background noise (○). Index of higher-order PC corresponds to number of removed masked volumewise PCs in prenormalization step.

  • FIGURE 8.
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    FIGURE 8.

    MSE between SD of background noise and scaled SD used by higher-order PC noise prenormalization: result from full-body study (A) and result from brain study (B). Logarithmic scale is used.

  • FIGURE 9.
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    FIGURE 9.

    MSE in different reconstructions for different prenormalizations, compared with optimal signal Embedded Image. FBP is used in A and B whereas OSEM is used in C and D. Measurements are from adrenal gland VOI (A and C) and stomach VOI (B and D). Index of higher-order PC corresponds to number of removed masked volumewise PCs in prenormalization step. Logarithmic scale is used.

  • FIGURE 10.
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    FIGURE 10.

    Slices from first 3 masked volumewise PCs from datasets reconstructed with FBP (A–C) and OSEM (D–F). Most adrenal gland and general tracer behavior is described by masked volumewise PC 1 (A and D). Masked volumewise PC 2 (B and E) describes early tracer accumulation in kidneys, whereas tracer concentration in stomach can be separated with masked volumewise PC 3 (C and F).

  • FIGURE 11.
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    FIGURE 11.

    One slice in original (A) and dimension-reduced (B) dataset showing adrenal gland (arrows).

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Journal of Nuclear Medicine Technology: 39 (1)
Journal of Nuclear Medicine Technology
Vol. 39, Issue 1
March 1, 2011
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Characterization and Reduction of Noise in Dynamic PET Data Using Masked Volumewise Principal Component Analysis
Per-Edvin Svensson, Johan Olsson, Fredrik Engbrant, Ewert Bengtsson, Pasha Razifar
Journal of Nuclear Medicine Technology Mar 2011, 39 (1) 27-34; DOI: 10.2967/jnmt.110.077347

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Characterization and Reduction of Noise in Dynamic PET Data Using Masked Volumewise Principal Component Analysis
Per-Edvin Svensson, Johan Olsson, Fredrik Engbrant, Ewert Bengtsson, Pasha Razifar
Journal of Nuclear Medicine Technology Mar 2011, 39 (1) 27-34; DOI: 10.2967/jnmt.110.077347
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